The rule of thumb is for every .010" milled off head, take .014" off intake... sounds like they did that for the OEM intake (it fits your current setup). New intake has original height machined in (sits higher on intake plane with heads milled).
I'd talk to the machine shop you would use, have them set it up to take .014" off the new intake, then while they are still set up, check the first pass cut of .014" with a trial fit on your block. If it hasn't dropped enough, have them run a second .014" pass on the intake... I'd be really surprised if they milled more than .020" off the heads/block, but you might have to have a 3rd .014" cut...
You are looking for 1/8" to 3/16" gap to the front and back block rails at centerline of engine. DO NOT USE CORK FRONT/REAR RAIL GASKETS WITH ALUMINUM INTAKE!!! The aluminum won't compress the cork like the cast iron intake will, and will never seal. Use RTV silicone sealer on front and rear rails (about 3/8" bead all along rails and overlapping the intake gasket at corners...
My aluminum intake sits 1/8" above the rails as measured with feeler gauges..