The voltage was okay to the box when you checked it, and, changing the coil did not eliminate the miss...so I think it's safe to say the box needs to go back to MSD for service.
Now, I think you said you are in Florida so it's pretty hot.
If the car runs okay before under hood heat builds up, then I would kinda doubt that the carb is bad and it may well be a heat problem. If it were me, I would monitor the fuel pressure when cold and when hot. It needs to be around six psi at all times.
I use about an 1/2" wood composite spacer which has less heat transfer than the plastic versions, but plastic should work. CP posted a link to a new spacer in one of the threads the other day that is supposed to be the best thing going.
Are you using a factory mechanical style pump, or an electric pump? Return line?
When you turn the car off after it gets hot, is the bowl still filled with fuel to the correct level after a few minutes have passed? Both bowls, I should have said.